Microsporidia have been known for some time to possess among the smallest genomes of any eukaryote. There is now a completely sequenced microsporidian genome, as well as several other large-scale sequencing efforts, so the nature of these genomes is becoming apparent. This paper reviews some of the characteristics of microsporidian genomes in general, and some of the recent discoveries made through comparative genomic analyses. In general, microsporidian genomes are both reduced and compacted. Reduction takes place through gene loss, which is understandable in obligate intracellular parasites that rely on their host for many metabolites. Compaction is a more complex process, and is as yet not fully understood. It is clear from genomes surveyed thus far that the remaining genes are tightly packed and that there is little non-coding sequence, resulting in some extraordinary arrangements, including overlapping genes. Compaction also seems to affect certain aspects of genome evolution, like the frequency of rearrangements. The force behind this compaction is not known, and is especially interesting in light of the fact that surveys of genomes that are significantly different in size yield similar complements of protein-coding genes. There are some interesting exceptions, including catalase, photolyase and some mitochondrial proteins, but the rarity of these raises an interesting question as to what accounts for the significant differences seen in the genome sizes among microsporidia.
Restraint-based comparative modeling was used for calculation and visualization of the H4-H5-loop of Na+/K+-ATPase from mouse brain (Mus musculus, adult male brain, α2-isoform) between the amino acid residues Cys336 and Arg758 in the E1 conformation The structure consists of two well separated parts. The N-domain is formed by a seven-stranded antiparallel β-sheet with two additional β-strands and five α-helices sandwiching it, the P-domain is composed of a typical Rossman fold. The ATP-binding site was found on the N-domain to be identical in both α2- and α1-isoforms. The phosphorylation Asp369 residue was found in the central part of the P-domain, located at the C-terminal end of the central β-sheet. The distance between the α-carbon of Phe475 at the ATP-binding site and the α-carbon of Asp369 at the phosphorylation site is 3.22 nm. A hydrogen bond between the oxygen atom of Asp369 and the nitrogen atom of Lys690 was clearly detected and assumed to play a key role in maintaining the proper structure of the physphorylaton site in E1 conformation., G. Tejral, L. Koláčná, A. Kotyk, E. Amler., and Obsahuje bibliografii
Calycanthus chinensis is an endangered plant of the national second-grade protection of China restricted in a small area in Zhejiang Province. We studied parameters of photosynthesis, chlorophyll (Chl) contents, and Chl fluorescence (minimum fluorescence, F0, maximum fluorescence, Fm, variable fluorescence, Fv, and Fv/Fm) of C. chinensis and Chimonanthus praecox. C. chinensis had lower compensation irradiance but higher saturation irradiance than C. praecox. Hence C. chinensis has more advantage in obtaining and utilizing photon energy and higher Chl content, and is more adaptive to higher temperature and propitious to thermal dissipation than C. praecox. In addition, C. chinensis produces abundant, well-preserved seed with a higher germination rate and a wider adaptability to temperature than C. praecox. Thus C. chinensis is prone to survival and viability, and gets rid of the endangered plant species of the national second-grade protection of China. and L. Z. Mao ... [et al.].
Field trials under rain-fed conditions at the International Center for Tropical Agriculture (CIAT) in Colombia were conducted to study the comparative leaf photosynthesis, growth, yield, and nutrient use efficiency in two groups of cassava cultivars representing tall (large leaf canopy and shoot biomass) and short (small leaf canopy and shoot biomass) plant types. Using the standard plant density (10,000 plants ha-1), tall cultivars produced higher shoot biomass, larger seasonal leaf area indices (LAIs) and greater final storage root yields than the short cultivars. At six months after planting, yields were similar in both plant types with the short ones tending to form and fill storage roots at a much earlier time in their growth stage. Root yield, shoot and total biomass in all cultivars were significantly correlated with seasonal average LAI. Short cultivars maintained lower than optimal LAI for yield. Seasonal PN, across cultivars, was 12% greater in short types, with maximum values obtained in Brazilian genotypes. This difference in PN was attributed to nonstomatal factors (i.e., anatomical/biochemical mesophyll characteristics). Compared with tall cultivars, short ones had 14 to 24 % greater nutrient use efficiency (NUE) in terms of storage root production. The lesser NUE in tall plants was attributed mainly to more total nutrient uptake than in short cultivars. It was concluded that short-stemmed cultivars are superior in producing dry matter in their storage roots per unit nutrient absorbed, making them advantageous for soil fertility conservation while their yields approach those in tall types. It was recommended that breeding programs should focus on selection for more efficient short- to medium-stemmed genotypes since resource-limited cassava farmers rarely apply agrochemicals nor recycle residual parts of the crop back to the soil. Such improved short types were expected to surpass tall types in yields when grown at higher than standard plant population densities (>10,000 plants ha-1) in order to maximize irradiance interception. Below a certain population density (<10,000 plants ha-1), tall cultivars should be planted. Findings were discussed in relation to cultivation and cropping systems strategies for water and nutrient conservation and use efficiencies under stressful environments as well as under predicted water deficits in the tropics caused by trends in global climate change. Cassava is expected to play a major role in food and biofuel production due to its high photosynthetic capacity and its ability to conserve water as compared to major cereal grain crops. The interdisciplinary/interinstitutions research reported here, including, an associated release of a drought-tolerant, short-stem cultivar that was eagerly accepted by cassava farmers, reflects well on the productivity of the CIAT international research in Cali, Colombia., and M. A. El-Sharkawy, S. M. de Tafur
A field study was conducted with the aim to elucidate photosynthetic responses of five emmer hulled wheat (Triticum turgidum ssp. dicoccum) accessions to 30 (N-limited) and 100 kg(N) ha-1
(N-sufficient) conditions at control and drought stress (irrigation after 30-40% and 60-70% depletion of available soil water, respectively). Chlorophyll (Chl) a and Chl b concentrations of the emmer wheats remained unchanged but net photosynthetic rate and dry mass increased and decreased, respectively, when received a sufficient amount of N. Smaller drought-induced decreases in Chl concentration, membrane stability index, and dry mass were concomitant to a greater decrease in intercellular CO2 concentration of emmer compared to the durum (Triticum turgidum) and bread wheats (Triticum aestivum). The lack of negative effect of insufficient N on Chl concentration and dry mass of emmer wheat suggests that this type of wheat possesses an obvious potential for organic farming., M. Vaghar, P. Ehsanzadeh., and Obsahuje bibliografii
The endothelium of different organs displays a remarkable heterogeneity, although it presents many common functional and morphological features. However, despite our knowledge of heterogeneity among endothelial cells from different sites, the differences between brain microvascular endothelial cells (BMEC) and coronary microvascular endothelial cells (CMEC) are poorly defined. The aim of this study was to investigate whether BMEC are distinct from CMEC at the protein level. Using the proteomic approach, we comparatively analyzed the proteome of cultured BMEC and CMEC. We reproducibly separated over 2000 polypeptides by using two-dimensional electrophoresis (2-DE) at pH range of 3-10. Using PDQuest software to process the 2-DE gel images, forty-seven protein spots were differentially expressed in the two-endothelial cells. Of these, thirty-five proteins are highly expressed in BMEC, whereas twelve proteins are highly expressed in CMEC. Fifteen proteins in BMEC and seven proteins in CMEC were identified with high confidence by matrix-associated laser desorption ionization time-of-flight mass spectrometer (MALDI-TOF-MS). Our data suggested that BMEC and CMEC were different in several aspects including cytokine and growth-related molecules, stress-related proteins, metabolic enzymes, signal transduction proteins and others. The identification of a set of proteins preferentially expressed in BMEC and CMEC provided new data on the heterogeneity of the endothelium., L. Lu, P.-Y. Yang, Y.-Ch. Rui, H. Kang, J. Zhang, J.-P. Zhang, W.-H. Feng., and Obsahuje bibliografii a bibliografické odkazy
The aim of study was to gain a deeper knowledge about local and systemic changes in photosynthetic processes and sugar production of pepper infected by Obuda pepper virus (ObPV) and Pepper mild mottle virus (PMMoV). PSII efficiency, reflectance, and gas exchange were measured 48 and/or 72 h after inoculation (hpi). Sugar accumulation was checked 72 hpi and 20 d after inoculation (as a systemic response). Inoculation of leaves with ObPV led to appearance of hypersensitive necrotic lesions (incompatible interaction), while PMMoV caused no visible symptoms (compatible interaction). ObPV (but not PMMoV) lowered Fv/Fm (from 0.827 to 0.148 at 72 hpi). Net photosynthesis decreased in ObPV-infected leaves. In ObPV-inoculated leaves, the accumulation of glucose, fructose, and glucose-6-phosphate was accompanied with lowered sucrose, maltoheptose, nystose, and trehalose contents. PMMoV inoculation increased the contents of glucose, maltose, and raffinose in the inoculated leaves, while glucose-6-phosphate accummulated in upper leaves., A. Janeczko, M. Dziurka, G. Gullner, M. Kocurek, M. Rys, D. Saja,
A. Skoczowski, I. Tóbiás, A. Kornas, B. Barna., and Obsahuje bibliografii
Long-term water uptake of Douglas-fir and Norway spruce trees, growing in condition of Moravian upland, was studied with aim of comparing sap flow in small roots with flow in stems. Sap flow was measured by the heat field deformation method using multi-point sensors for stems and single-point sensors for roots. Differences between species were found in relationships between sap flow in tree stems and water uptake by roots, suggesting that Douglas-fir is able to take water from deeper soil more efficiently than spruce. This allows Douglas-fir to transpire more water especially during drought and grow faster than spruce. These biological features should be taken into account for future forest species compositions because they may have impact on both, forestry and hydrology.
Previously, the changes in phagocyte functions such as adherence, chemotaxis or TNFa production were found to be associated with oxidative stress in endotoxin-induced septic shock. However, in this type of oxidative stress the lymphocyte involvement has rarely been studied. In the present report, we analyzed the above functions in peritoneal lymphocytes from male and female BALB/c mice with a lethal endotoxic shock caused by intraperitoneal injection of E. coli lipopolysaccharide (LPS) (100 mg/kg), male and female Swiss mice with lethal endotoxic shock caused by intraperitoneal injection of LPS (150 and 250 mg/kg, respectively) or non-lethal endotoxic shock (100 mg/kg). In peritoneal lymphocytes obtained at 0, 2, 4, 12 or 24 h after LPS injection, the first two functions of these cells in the immune response, i.e. adherence to tissues and directed migration (chemotaxis), were studied. At 0, 0.5, 1, 1.5, 2, 4, 12 and 24 h after LPS injection, TNFa released by lymphocytes was also analyzed. The results show that endotoxic shock increases the adherence and TNFa release, and decreases the chemotaxis of peritoneal lymphocytes. These changes were more significant in mice with lethal than with non-lethal endotoxic shock, a fact that confirms the important role of lymphocytes during endotoxic shock., V. M. Víctor, D. Rubio, M. De la Fuente., and Obsahuje bibliografii
Increase of harmful radiation to the Earth’s surface due to ozone depletion results in higher exposure to harmful ultraviolet- B radiation (UV), while fluctuations in seawater salinity may alter water density, ionic concentration, nutrient uptake, and osmotic pressure. This study evaluated the effects of salinity and UV on metabolism and morphology of Acanthophora spicifera (M.Vahl) Børgesen. Water with 30 and 37 psu [g(salt) kg-1(sea water)] was used for experiments during 7 d of exposure to UV (3 h per day). We demonstrated that UV treatment predisposed, irrespective of salinity, A. spicifera to a decrease in its growth rate and cell viability, as well as affected its morphological parameters. After exposure to PAR + UVA + UVB (PAB), samples showed structural changes and damage, such as increasing cell wall thickness and chloroplast disruption. Our results indicate that UV led to dramatic metabolic changes and cellular imbalances, but more remarkable changes were seen in samples exposed to high salinity., D. T. Pereira, C. Simioni, L. C. Ouriques, F. Ramlov, M. Maraschin, N. Steiner, F. Chow, Z. L. Bouzon, É. C. Schmidt., and Obsahuje bibliografii