Phylogenetic relationships of Sciurus were examined based on the mitochondrial cytochrome b gene sequences of three Old World and four New World species. The purpose was to test for monophyly in Old World Sciurus (S. anomalus, S. lis, and S. vulgaris). Phylogenetic trees well supported clustering of (1) S. anomalus, (2) S. lis and S. vulgaris, and (3) the four New World Sciurus species. Sciurus anomalus was more closely related to the clade consisting of New World Sciurus species than the one consisting of S. lis and S. vulgaris, indicating a polyphyletic relationship in Old World Sciurus. The primary divergence of Sciurus may have taken place early on the Eurasian Continent. Then, the ancestral stock of modern New World Sciurus would have migrated from the Eurasian Continent to the North American Continent.
The systematic position and phylogenetic relationships of the family Cortrematidae Yamaguti, 1958 have always been controversial. In the present study, the phylogenetic relationships of this family and its constituent genera and families within the superfamily Microphalloidea were evaluated using previously published and newly obtained sequences of 28S rDNA of Cortrema magnicaudata (Bykhovskaya-Pavlovskaya, 1950) (Cortrematidae), Phaneropsolus praomydis Baer, 1971 and Microtrema barusi Sitko, 2013 (Phaneropsolidae). Results clearly demonstrate that the genus Cortrema Tang, 1951 is closest to Gyrabascus Macy 1935, both genera forming one of the clades within the family Pleurogenidae in the superfamily Microphalloidea and sharing several important morphological features. Thus, the family Cortrematidae should be considered among synonyms of the Pleurogenidae. Based on the analysis of morphology, C. corti Tang, 1951, C. testilobata (Bykhovskaya-Pavlovskaya, 1953) and C. niloticus Ashour, Ahmed et Lewis, 1994 are considered junior synonyms of C. magnicaudata. The phylogenetic position of P. praomydis as a family-level branch not showing close relationships with other families of the Microphalloidea, supports the status of the Phaneropsolidae as an independent family. The genus Parabascus Looss, 1907 previously considered within the Phaneropsolidae clearly belongs to the Pleurogenidae. In addition, the molecular phylogeny has demonstrated that the recently described phaneropsolid Microtrema barusi belongs to the microphallid genus Microphallus Ward, 1901. Therefore, Microtrema Sitko, 2013 is considered a junior synonym of Microphallus. Our analysis has also confirmed the status of Collyriclidae as a family within the Microphalloidea. Not yet sequenced representatives of other families within the Microphalloidea (e.g. Anenterotrematidae, Eumegacetidae, Renschtrematidae, Stomylotrematidae, etc.) need to be included in future molecular phylogenetic studies to better unravel the taxonomic structure and content of this diverse digenean superfamily.
The eight spined larch bark beetles infest various species of Larix in Europe and Asia. Ips cembrae is the only Ips species with larch as its main host. Ips subelongatus, Ips fallax, Ips shinanonensis and Ips cembrae var. engadinensis are treated as synonyms of I. cembrae. These three putative species and the one variety are distinguished by their host tree and geographic distribution, as it is not possible to distinguish them on the basis of morphological differences. Beetles were collected from European and Asian populations, and from hosts and geographic areas where the species were first found and described and in their natural ranges of distribution. These beetles were used to study the phylogenetic relationships of the eight spined larch bark beetles. A region of the mitochondrial gene was analysed and the blue-stain fungi associated with I. cembrae in Europe were investigated and compared with those recorded as associated with the larch bark beetle in Japan. Only minor sequence differences were detected between the populations in Europe and Asia. However, the European populations differed by 4.3% from the Asian populations. The phylogenetic analysis placed the European and Asian haplotypes in significantly distinct clusters. This distinction was supported by the finding of an insertion/deletion in a non-coding region of the mitochondrial DNA. Furthermore, there are differences in the fungi associated with the eight spined larch bark beetles in Europe and Japan. The results suggest that the I. cembrae complex contains at least two taxa: I. cembrae infesting larch in Europe and I. subelongatus infesting larch in Asia.
Phylogenetic relationships among Palaearctic Ribes and/or Onagraceae inhabiting Aphis species from five countries were examined using mitochondrial gene cytochrome oxidase I (CO-I) and nuclear gene elongation factor 1 α (EF-1α) sequences. There was no major conflict between the trees obtained from two data sets; nodes with strong bootstrap support from one analysis never contradicted those strongly supported by the other analysis. Palaearctic species of the subgenus Bursaphis (= "grossulariae" species group of the genus Aphis) form a monophyletic group within the genus Aphis. All these analyses indicated that Aphis grossulariae and A. schneideri are close relatives, which is supported by the information on experimental and probably also natural hybridisation. Our data indicate the independent colonisation of Ribes spp. by two species groups of the genus Aphis: A. triglochinis (subgenus Aphis s. str.), and A. grossulariae and A. schneideri (subgenus Bursaphis). Once the subgenus Bursaphis (and other subgenera) is accepted, the subgenus Aphis s. str. will require further subdivision.
This study reports the results of a molecular phylogenetic analysis of thirty three species of Ennominae (Lepidoptera: Geometridae). The aim of this analysis was to determine the phylogenetic affinities of 13 European species not previously studied using these methods. Fragments of seven nuclear genes, elongation factor 1 alpha (EF-1α), wingless (wgl), isocitrate dehydrogenase (IDH), glyceraldehyde-3-phosphate dehydrogenase (GAPDH), ribosomal protein S5 (RpS5) and expansion segments D1 and D2 of the 28S rRNA gene and fragment of one mitochondrial gene, cytochrome oxidase subunit I (COI), were used. In the analysis using Bayesian phylogenetic inference, original gene sequences of the target species were combined with a larger data matrix of 20 species of Ennominae, used in a previous study (Wahlberg et al., 2010, Mol. Phylogenet. Evol. 55: 929-938). Most notably, the results indicate that the representatives of the genera Cepphis, Plagodis, Pseudopanthera and Selenia form a well-supported monophyletic group which appeared as the sister clade to the rest of the "ennomine" group of tribes. On the other hand, Crocallis and Opisthograptis group together with Ennomos. These results conflict with previous tribal subdivisions of the subfamily pointing to the need to reconsider the concepts of Ennomini and Ourapterygini. Within the tribe Macariini, the genus Macaria appears to be more closely related to Itame (= Speranza) than to Chiasmia clathrata. The emerging phylogenetic tree of Ennominae suggests only a limited phylogenetic inertia in body size making this group a promising target for comparative studies on this central life history trait and its correlates. and Erki Õunap, Juhan Javoiš, Jaan Viidalepp, Toomas Tammaru.
Small subunit rRNA sequences were obtained from 38 representatives mainly of the nematode orders Spirurida (Camallanidae, Cystidicolidae, Daniconematidae, Philometridae, Physalopteridae, Rhabdochonidae, Skrjabillanidae) and, in part, Ascaridida (Anisakidae, Cucullanidae, Quimperiidae). The examined nematodes are predominantly parasites of fishes. Their analyses provided well-supported trees allowing the study of phylogenetic relationships among some spirurine nematodes. The present results support the placement of Cucullanidae at the base of the suborder Spirurina and, based on the position of the genus Philonema (subfamily Philoneminae) forming a sister group to Skrjabillanidae (thus Philoneminae should be elevated to Philonemidae), the paraphyly of the Philometridae. Comparison of a large number of sequences of representatives of the latter family supports the paraphyly of the genera Philometra, Philometroides and Dentiphilometra. The validity of the newly included genera Afrophilometra and Caranginema is not supported. These results indicate geographical isolation has not been the cause of speciation in this parasite group and no coevolution with fish hosts is apparent. On the contrary, the group of South-American species of Alinema, Nilonema and Rumai is placed in an independent branch, thus markedly separated from other family members. Molecular data indicate that the skrjabillanid subfamily Esocineminae (represented by Esocinema bohemicum) should be either elevated to the rank of an independent family or Daniconematidae (Mexiconema africanum) should be decreased to Daniconematinae and transferred to the family Skrjabillanidae. Camallanid genera Camallanus and Procamallanus, as well as the subgenera Procamallanus and Spirocamallanus are confirmed to be paraphyletic. Paraphyly has also been found within Filarioidea, Habronematoidea and Thelazioidea and in Cystidicolidae, Physalopteridae and Thelaziidae. The results of the analyses also show that Neoascarophis, Spinitectus and Rhabdochona are monophyletic, in contrast to the paraphyletic genus Ascarophis. They further confirm the independence of two subgenera, Rhabdochona and Globochona, in the genus Rhabdochona. The necessity of further studies of fish-parasitizing representatives of additional nematode families not yet studied by molecular methods, such as Guyanemidae, Lucionematidae or Tetanonematidae, is underscored.
The genus Dasytricheta Bernhauer, 1943 is redefined. The genus Pyromecroma Cameron, 1945 is considered a new synonym of Dasytricheta. Eleven valid species are recognised in the genus: Dasytricheta spectabilis Bernhauer, 1943 (the type species of Dasytricheta), D. funesta (Broun, 1912) comb. n. (the type species of Pyromecroma, originally described in Myrmecopora Saulcy, 1864), and nine species described as new: Dasytricheta haastiana sp. n., D. hookeriana sp. n., D. intermedia sp. n., D. kapuniana sp. n., D. mahitahiana sp. n., D. periana sp. n., D. shotoveriana sp. n., D. testacea sp. n. and D. waihoana sp. n. The taxa are diagnosed, keyed and illustrated. The phylogeny of Dasytricheta is analysed using cladistic methods. The systematic position of Dasytricheta within the Aleocharinae is discussed.
The phylogenetic relationships in the myrmicine ant genus Myrmecina were analyzed using 1,281 bp of the mitochondrial cytochrome c oxidase I gene. Intermorphic queens observed in M. graminicola (Europe), M. nipponica (Japan), M. americana (North America; reported for the first time) and M. sp. A (Java) were reconstructed as an ancestral trait in this genus. Molecular-clock-based age estimates suggest that queen polymorphism evolved in Myrmecina at the latest during the Miocene. In terms of biogeographical regions, the inferred chronological order of divergence is: (oriental, (nearctic, (western palearctic, eastern palearctic))).
The box tree moth, Cydalima perspectalis (Walker, 1859) comb. n., is native to India, China, Korea, Japan and the Russian Far East. Its larvae are a serious pest of different species of Buxus. Recently, C. perspectalis was introduced into Europe and first recorded from Germany in 2006. This species has been placed in various spilomeline genera including Palpita Hübner, 1808, Diaphania Hübner, 1818, Glyphodes Guenée, 1854 and the monotypic Neoglyphodes Streltzov, 2008. In order to solve this nomenclatural confusion and to find a reasonable and verifiable generic placement for the box tree moth, the morphology of the above mentioned and some additional spilomeline taxa was investigated and their phylogeny analysed. The results show that C. perspectalis belongs to a monophylum that includes three of the genera in which it was previously placed: Glyphodes, Diaphania and Palpita. Within this monophylum, it is closely related to the Asian Cydalima Lederer, 1863. As a result of this analysis, Sisyrophora Lederer, 1863 syn. rev. and Neoglyphodes Streltzov, 2008 syn. n. are synonymised with Cydalima Lederer, 1863, and five species are transferred to this genus: Cydalima capriniodes (Hampson, 1912) (Glyphodes) comb. n., Cydalima decipiens (Hampson, 1912) (Glyphodes) comb. n., Cydalima joiceyi (Janse, 1924) (Margaronia) comb. n., Cydalima perspectalis (Walker, 1859) (Phakellura) comb. n. and Cydalima pfeifferae (Lederer, 1863) (Sisyrophora) comb. rev.
A new genus and new species of Cantacaderinae (Heteroptera: Tingidae) is described, Caledoderus monteithi. A key to genera is provided. The phylogenetic relationships among the Cantacaderinae, including this new genus and species, are revisited. The results are congruent with previous studies. However, the Ceratocaderini is a sister group of Carldrakeaninae and not Cantacaderini, even if only weakly supported by the analysis. Therefore, the status of Ceratocaderini and Cantacaderini is maintained, whereas Carldrakeanini stat. nov. is reduced to tribal level and they are all included in the Cantacaderinae., Eric Guilbert., and Obsahuje seznam literatury