The sequence diversity in the mitochondrial cytochrome-c oxidase I (COI) gene was evaluated as a tool for resolving differences among species of European adelgids collected from several localities across the Czech Republic. Members of 7 genera and 16 species were examined, and as outgroups, two species of Phylloxeridae were used. Sequence divergences within species were on average less than 0.15%, whereas divergences between species ranged from 0.0 to 4.12% for congeneric and to 13.24% for intergeneric comparisons. It is concluded that DNA barcoding of Adelgidae is a powerful tool for identifying genera, but at the species level it works only in those cases where there are no species complexes. Nevertheless, it can be used as a complement to traditional, morphological taxonomy.
Flies of the Colocasiomyia toshiokai species group depend exclusively on inflorescences/infructescences of the aroid tribe Homalomeneae. The taxonomy and reproductive biology of this group is reviewed on the basis of data and samples collected from Southeast Asia. The species boundaries are determined by combining morphological analyses and molecular species delimitation based on sequences of the mitochondrial COI (cytochrome c oxidase subunit I) gene. For the phylogenetic classification within this species group, a cladistic analysis of all the member species is conducted based on 29 parsimony-informative, morphological characters. As a result, six species are recognised within the toshiokai group, including one new species, viz. C. toshiokai, C. xanthogaster, C. nigricauda, C. erythrocephala, C. heterodonta and C. rostrata sp. n. Various host plants are utilised by these species in different combinations at different localities: Some host plants are monopolized by a single species, while others are shared by two or three species. C. xanthogaster and C. heterodonta cohabit on the same host plant in West Java, breeding on spatially different parts of the spadix. There is a close synchrony between flower-visiting behaviour of flies and flowering events of host plants, which indicate an intimate pollination mutualism.
DNA barcoding surveys of small insects usually extract DNA from either a complete insect or a leg. Little is known about how to optimize DNA quantity and quality from different insect parts while preserving a morphological voucher. Here, we quantify DNA yield from different body parts (antenna, hind leg, forewing, hind wing and abdomen) of the micro-moth Cameraria ohridella (Lepidoptera: Gracillariidae) using fluorescent nucleic acid stain (PicoGreen). Samples were preserved in 100% ethanol or dried for three weeks. Our experiment was designed to encompass practical sampling options during fieldwork. DNA quality was assessed by PCR amplification of the mitochondrial COI barcode fragment. In addition, we compared PCR amplification using Platinum® Taq and Qiagen DNA Polymerase and quantified sequence success of amplified DNA. We show that overall, dry parts showed higher eluted DNA yields. PCR and sequencing success rate were slightly higher for dry tissue than ethanol-preserved parts. We also show that Platinum® Taq yielded the highest PCR success rate and that all dry tissues are sequenceable. The optimal strategy for DNA barcoding surveys is therefore to mount micro-Lepidoptera specimens in the field for morphological analysis and sample tissues (hind legs are favoured) from dried samples at a later time (several weeks) in the lab for DNA barcoding using preferentially Platinum® Taq. If larger amounts of DNA are required (i.e. for nuclear gene sequencing), several legs from one side of the specimen or the abdomen should be preserved in pure ethanol., Carlos Lopez-Vaamonde ... [et al.]., and Obsahuje seznam literatury
The first record of the Azalea rough bollworm, Earias roseifera Butler, 1881 in Europe is reported. Larvae were collected on twigs, sprouts and buds of several azalea hybrids growing in a botanical garden in the province of Como (Northern Italy). The larvae fed mainly on the flower and vegetative buds, which resulted in a significant reduction in the amount of blossom. Specimens were identified using both morphological characters and a molecular analysis of the DNA barcode (COX1 sequence).
Based on molecular markers (COII and ITS1-ITS2) and morphological data, we describe three new Neotropical species of Gyrodactylus von Nordmann, 1832 from Scleromystax barbatus (Quoy et Gaimard) and Scleromystax macropterus (Regan) from southern Brazil. The three new species can be distinguished from each other by sequences of both molecular markers and morphology of hooks and anchors. Gyrodactylus bueni sp. n. is characterised by having hook with shaft curved, heel straight, shelf straight, toe pointed, anchor with superficial root slender, elongate and male copulatory organ armed with two rows of spinelets. Gyrodactylus major sp. n. presents hook with shaft, point curved, proximal shaft straight, heel convex, shelf convex, toe concave, anchor with superficial root robust and male copulatory organ armed with two rows of spinelets. Gyrodactylus scleromystaci sp. n. presents hook with shaft, point recurved, heel convex, shelf convex, toe pointed, anchor with superficial root curved and male copulatory organ armed with two rows of spinelets. These species appear to be closely related to other species of Gyrodactylus known from other species of Callichthyidae. These new species, however, differ by the comparative morphology of the haptoral hard structures and molecular data. Comparative analysis of sequences from these species of Gyrodactylus suggests that the COII gene may represent an important marker for the taxonomy of species of Gyrodactylidae and, perhaps, for species of other lineages of Monogenoidea.
Many factors contribute to the 'invasive potential' of species or populations. It has been suggested that the rate of genetic evolution of a species and the amount of genetic diversity upon which selection can act may play a role in invasiveness. In this study, we examine whether invasive species have a higher relative pace of molecular evolution as compared with closely related non-invasive species, as well as examine the genetic diversity between invasive and closely related species. To do this, we used mitochondrial cytochrome c oxidase subunit I sequences of 35 species with a European native range that are invasive in North America. Unique to molecular rate studies, we permuted across sequences when comparing each invasive species with its sister clade species, incorporating a range of recorded genetic variation within species using 405,765 total combinations of invasive, sister, and outgroup sequences. We observed no significant trend in relative molecular rates between invasive and non-invasive sister clade species, nor in intraspecific genetic diversity, suggesting that differences in invasive status between closely related lineages are not strongly determined by the relative overall pace of genetic evolution or molecular genetic diversity. We support previous observations of more often higher genetic diversity in native than invaded ranges using available data for this genetic region.
The taxonomy and distribution of rodents in Zambia was comprehensively summarized in 1978 by W.F.H. Ansell in his excellent book Mammals of Zambia. Despite the fact that during the last three decades many new taxonomic revisions of African rodents were published and extensive new material collected, not much work has been done on Zambian rodents since the book publication. Here we summarize the current knowledge of one of the most speciose group of African rodents, the tribe Praomyini, in Zambia. We review available historical records and revise our recently collected material by sequencing the mitochondrial DNA gene of cytochrome b. The presence of eight species of Praomyini in Zambia is documented and the pattern of their geographical distribution is described and discussed. Two species, Praomys minor and Mastomys coucha, are reported for the first time from Zambia and Praomys cf. jacksoni probably represents a new undescribed species. On the other hand, the actual occurrence of Colomys goslingi, known in Zambia only from one historical record, is questionable. The results document the usefulness of the DNA barcoding approach for description of species diversity of taxonomically complicated groups with many cryptic species.